Sensitivity evaluation of SYBR green I, SYBR safe and calcein dyes for detection of human papillomavirus 16 by loop-mediated isothermal amplification

Suharni Mohamad, and Nuur Ezzatyhusna Mk, and Nurul Izzati Hassan, and Siti Suraiya MN, and Suharni M, (2017) Sensitivity evaluation of SYBR green I, SYBR safe and calcein dyes for detection of human papillomavirus 16 by loop-mediated isothermal amplification. Medicine & Health, 12 (2). pp. 220-229. ISSN 2289-5728

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Official URL: http://www.medicineandhealthukm.com/toc/12/2

Abstract

Loop-mediated isothermal amplification (LAMP) is a gene amplification technique whereby the amplification products are commonly visualized as turbidity by naked eye in the presence of magnesium pyrophosphate precipitation. An appropriate intercalating dye is important as it could increase the sensitivity and reduce the false positive and false negative results for the detection. The study aimed to compare the performance of three different intercalating dyes; SYBR Green I, SYBR Safe and calcein-based dyes in HPV-16 LAMP assay by naked-eye visualization, gel electrophoresis and real-time monitoring. The LAMP assay was carried out using a Loopamp DNA amplification kit in 25 μl volumes. The reaction mixture was incubated at 60

Item Type:Article
Keywords:Dyes; Human papillomavirus; Loop-mediated isothermal amplification
Journal:Medicine & Health
ID Code:12682
Deposited By: ms aida -
Deposited On:14 Mar 2019 04:07
Last Modified:17 Mar 2019 12:08

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